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a 5007 Riverside Oaks Dr., Kingwood, TX 77345
b Chair of Agronomy and Plant Breeding, Centre for Life and Food Sciences Weinhenstephan, Technical Univ. Munich, Am Hochanger 2, 85350 Freising, Germany
c Seameo Biotrop, Southeast Asian Regional Centre for Tropical Biology, Jalan Raya Tajur km. 6, P.O. Box 116, Bogor, Indonesia
d CIMMYT, Lisboa 27, Apto. Postal 6-641, 06600 Mexico D.F
e Deceased), Dep. of Crop Genetics, John Innes Centre, Norwich Research Park, Colney, Norwich, NR4 7UH, UK
* Corresponding author (jvanbeem{at}kingwoodcable.net)
| ABSTRACT |
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Abbreviations: CS, Chinese Spring Eps, earliness per se MAS, marker-assisted selection PCR, polymerase chain reaction Ppd, photoperiod SSR, simple sequence repeats TD, Triple Dirk Vrn, vernalization
| INTRODUCTION |
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To achieve geographical and environmental adaptability, it is important that wheat varieties flower at times that are appropriate to a particular environment. Growth of the flower structure must occur during an optimal period with ample time for flower development and grain fill. The flowering habits of wheat are determined primarily by a complex group of genes for Vrn, Ppd, and Eps that interact with the environment to regulate the rate and development of floral primordia. Because of the use of diverse genetic material and multiple selection sites, most CIMMYT wheat germplasm contains different combinations of Vrn, Ppd, and Eps genes that lengthen or shorten wheat's life cycle, avoiding abiotic stresses that are present in global wheat-growing areas. The adaptability of CIMMYT semidwarf wheats to diverse environments depends to a large extent on the variation and effect that these three factors have on flower development.
Vernalization insensitivity or low vernalization response is known to be under control of an orthologous series of dominant alleles at the Vrn-A1, Vrn-B1, and Vrn-D1 loci that are located in the long arms of group 5 chromosomes (Worland 1996). Other orthologous series of Vrn genes are also predicted to exist in chromosomes of homeologous groups 1 (Vrn-3) and 4 (Vrn-2) as evidenced from orthology with barley (Laurie et al., 1995) and T. monococcum L. (Dubcovsky et al., 1998). Vrn4, present in Triple Dirk F, is located on the long arm of chromosome 5D, while the chromosomal origin of Vrn-B4 has yet to be determined (McIntosh et al., 2003). In addition to these major vernalization genes, genes with minor effects have also been reported on chromosome 7B (Vrn-B4 or Vrn5; Law 1966).
The response to photoperiod is mediated primarily by the orthologous gene series Ppd-A1, Ppd-B1, and Ppd-D1 on the short arms of group 2 chromosomes (Worland et al., 1998). Genes on other chromosomes, particularly 3D, 4B, 6B, and all chromosomes on group 1, have also been implicated in determining photoperiod response (Worland et al., 1998).
Vrn and Ppd gene systems have been investigated in various studies related to adaptation, and results have shed some light on the benefits that could be obtained through their conscious manipulation within spring or winter types. Stelmakh (1993) evaluated 27 genetic effects of three Vrn genes and concluded that the highest yield was predicted for varieties containing Vrn-D1. He recommended greater involvement of Vrn-D1 donors, particularly when breeding spring cultivars with improved adaptation to late drought and heat stress. Similarly, Worland (1996) reported a yield advantage of 35% in southern European environments with the introduction of a single photoperiod-insensitive gene, Ppd-D1. The benefits were reflected in accelerated maturity, which allows the crop to escape the hot, dry conditions of late summer, while sensitive genotypes in northern Europe showed a longer grain fill period and higher grain yields.
Numerous studies have reported the effects of Eps on the rate of development of wheat. Eps may be expressed as the minimum number of days to reproductive growth, once vernalization and photoperiod requirements are satisfied. This factor was initially reported by Syme (1968), who found that wheat's basic development period was influenced by mean daily temperature. Ford et al. (1981) coined the term "earliness genes" and proposed that they were different from genes controlling photoperiod sensitivity. More recently, Miura and Worland (1994) found that Eps genes have striking effects on ear-emergence time by reducing the number of days to heading independently of environmental stimuli. Slafer (1996) re-examined the assumptions that earliness genes are independent of photoperiod and vernalization and that differences in earliness genes apply only from the vegetative period to floral initiation. Numerous publications have concluded that genetic factors related to earliness are polygenic in nature and may be located on chromosomes 2B (Scarth and Law, 1983), 3A, 4A, 4B, and 6B (Hoogendoorn, 1985b), and 3A (Miura and Worland, 1994). Kato and Wada (1999) determined that broad-sense heritability of earliness ranged from 0.90 to 0.99 and could be efficiently optimized through artificial selection.
Although the influence that earliness per se genes exert on developmental rate is considered minimal when compared with photoperiod and vernalization, they may cause developmental variations that ensure grain fill by avoiding harsh environmental conditions. This intrinsic ability to accelerate or delay development by a few days may be primarily a result of a dynamic interaction between genotype and temperature fluctuations (Slafer and Rawson, 1995). Despite indications that specific combinations of Vrn, Ppd, and Eps genes may result in ideal wheat developmental patterns, there is little information on requirements for broad or specific adaptation.
The purpose of this research was to characterize CIMMYT cultivars for the presence of development genes and study the potential association of specific gene combinations with adaptability. Thus, the objectives of the present study were to (i) characterize CIMMYT-derived cultivars for Vrn, Ppd, and Eps; (ii) test whether earliness per se is a constitutive genotypic characteristic that delays or accelerates flowering depending on environmental conditions; and (iii) identify diagnostic molecular markers for the vernalization response gene Vrn-D1 to significantly increase the efficiency of germplasm characterization and plant selection.
| MATERIALS AND METHODS |
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To determine the Ppd gene composition, all genotypes were crossed with Mara containing Ppd-D1, Chinese Spring containing Ppd-B1, and C591 containing Ppd-A1. To completely satisfy the vernalization requirement, F2 seeds were imbibed for 48 h at room temperature and vernalized for 8 wk at 4°C. The vernalized F2 seed was space-planted with 8 to 10 cm between plants at CIMMYT's station in Ciudad Obregon, Mexico (27°29' N, 109°56' W). The sowing date in January 2002 coincided with a 10-h photoperiod and an average temperature of 16°C. It was assumed that a short-day season during the early growth stages would not satisfy Ppd requirements, thus making the segregation for Ppd genes evident. Flowering dates were recorded for 100 to 200 plants in each F2 population, and segregation analysis of early vs. late-flowering plants was done in May 2002.
Nuclear DNA extraction from primary leaves of 51 genotypes, the TD series, and 94 individuals of Vrn-D1 mapping population Chinese Spring (CS) x CS(Hope5D) essentially followed the procedure of Saghai-Maroof et al. (1984), with modifications described by Huang et al. (2000). Primer sequences and PCR protocols for wheat SSR markers Xgwm212-5D and Xgwm292-5D were as described in Röder et al. (1998). Forward primers were labeled with 6-FAM for fragment detection on an ABI PRISM 377 sequencer (Applied Biosystems, Foster City, CA). Two-point analysis of Vrn-D1 and Xgwm292-5D segregation data from 94 single chromosome recombinant lines (SCRLs) of cross Chinese Spring (CS) x CS(Hope5D) was conducted with the computer program MAPMAKER version 3.0b (Lander et al., 1987).
| RESULTS AND DISCUSSION |
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Differences in genotypic frequencies of vernalization genes might aid in explaining the selection and geographical adaptation of CIMMYT-derived cultivars. This study found that success in terms of wide adaptation may be associated with the presence of the Vrn-D1 gene, as demonstrated by its high frequency. It is interesting to note that the three most widely adapted varieties (Pastor, Attila, and Kauz) contained Vrn-D1 as the sole vernalization gene. Every year an estimated 8 to 9 million hectares worldwide are sown to these varieties, which are still being used to introduce high-yield genes. The Vrn-D1 gene was initially introduced to CIMMYT cultivars through the Japanese cultivar Akakomugi, which was used to create Mentana, an Italian cultivar (Stelmakh, 1990). Mentana was used by N.E. Borlaug to develop the semidwarf varieties Lerma Rojo 64 and Sonora 64, which were, in turn, responsible for the wide distribution of Vrn-D1 in South and Southeast Asian cultivars. It would appear that conscious selection of Vrn-D1 in CIMMYT's breeding program may have broadened the adaptation of wheat. Furthermore, national programs aiming to breed more widely adapted cultivars may benefit by including Vrn-D1 to produce developmental patterns suited to multiple target areas in their breeding programs. These results are in agreement with those found by Stelmakh (1998), who reported an increased presence of Vrn-D1 in cultivars adapted to growing areas near the equator. Early-flowering photoperiod-insensitive wheats exposed to stress at grain-fill were found to have a marked yield advantage if they carried Vrn-D1.
From previous studies on earliness factors (Flood and Holloran, 1984), it is known that 8 wk of cold treatment and 24 h of light will satisfy wheat's vernalization and photoperiod requirements. Any residual differences in days to flowering could be attributed to earliness per se genes. The ANOVA conducted on Eps indicated that the differences between genotypes and the interaction between genotype and temperature were highly significant (P < 0.0001) (Table 2). The LSD0.05 of genotypes for earliness per se under warm and cool temperature regimes was 5.9 and 2.1 d, respectively. The effect of temperature on earliness per se varied widely in the genotypes tested (Table 1). Except for one genotype with the same flowering date under both regimes, all cultivars flowered later under the cold regime, with delays ranging from 4 to 26 d.
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In this study, the rate of development in most CIMMYT genotypes was responsive to temperature. Our results are in agreement with numerous studies (Angus et al., 1981; Slafer and Rawson, 1994) that found all genotypes to be responsive to temperature but with genotypic variation in sensitivity. Results reported by Slafer and Rawson (1995) found that in four genotypes the intrinsic earliness factor is a complex interaction between temperature and development. The present study examined 51 genotypes and found that earliness per se factors appear to be related to temperature, with most cultivars flowering earlier in warm temperatures, but the degree of temperature sensitivity varied widely and resulted in temperature x genotype interactions. Earliness factors also appeared to be constitutive in some cultivars, with flowering being independent of temperature.
The current study also set out to determine the relationship between earliness per se (vernalization and photoperiod effects removed) and earliness in flowering under field conditions. It is generally assumed that Vrn and Ppd genes have the strongest influence over early developmental stages and that these genes mask the effect of the earliness per se genes. The number of days to flowering for 51 cultivars grown under field conditions was averaged for 2000 and 2001 planting dates. Earliness per se for cultivars grown under the cool temperature regime was chosen over the warm regime since field conditions in Toluca at planting time closely resemble the 16/6°C day/night temperature in the cool regime. Figure 1 shows the regression analysis between days to flowering under field conditions and earliness per se, with a significant coefficient of 0.66. These results indicate that although the earliness per se genes have thus far been considered minor when compared with other developmental genes, they are nonetheless strong enough to cause earlier flowering dates in the presence of Ppd and Vrn.
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There may be two reasons for not achieving our goal: first, the populations may have required an earlier sowing date. A January sowing date meant that the F2 populations experienced a light regime of more than 10 h of sunlight at 2 to 3 mo of development. It would have been more appropriate to plant the populations in November to ensure that the first 3 to 4 mo of development were under a short-day regime. Second and more importantly, there are earliness per se genes influencing the flowering dates and confounding the effect of the photoperiod genes. As discussed above, in some varieties earliness per se genes may delay the flowering date by up to 4 wk in response to temperature fluctuations. Theoretically, it may be possible to remove the earliness per se effect if the delay in flowering is known for the location and sowing time of the F2 populations. However, this may pose new problems, since previous studies (Scarth and Law, 1983; Hoogendoorn, 1985b; Miura and Worland, 1994) have found that numerous earliness genes are located on different chromosomes and presumably segregate concurrently with Ppd genes. A more rigorous study is necessary to develop protocols that would separate the effects of photoperiod and earliness per se genes.
Another important aim of the present study was to validate molecular markers for Vrn-D1, the most frequent vernalization response gene. Fifty-one genotypes and the TD series were analyzed with microsatellite markers Xgwm292-5D and Xgwm212-5D, which were found to be closely linked to Vrn-D1 in SCRL population Chinese Spring (CS) x CS(Cheyenne 5D) (Snape et al., 2001).
The close genetic linkage between Vrn-D1 and Xgwm292-5D (2.8 cM) was confirmed with segregation data from 94 SCRLs of cross CS x CS(Hope5D). The size of the Xgwm292-5D marker allele inherited from CS was 221 bp, whereas the size of the allele inherited from Hope was 217 bp. Five different marker alleles at the Xgwm292-5D locus were found within the 51 wheat genotypes tested (Table 1). The 215-bp allele was the most frequent (60.8%), followed by 223 and 213 bp (13.7% each), and 211 and 217 bp (5.9% each). The 215-bp microsatellite allele was also present in TD-E, the Vrn-D1 tester line and, therefore, is a potential indicator of the presence of Vrn-D1. The remaining TD lines displayed the 211-bp allele. Experiments comparing different Vrn gene compositions in 51 genotypes showed that the presence or absence of Vrn-D1 was reliably detected in 39 (76.5%) genotypes when using the 215-bp allele of microsatellite Xgwm292-5D (Table 1). Eight genotypes shown to carry Vrn-D1 displayed a microsatellite allele other than 215 bp. The cultivars Hubei, Pitta, Sids 4, and Inqalab 91 were not shown to contain the Vrn-D1 allele in segregation analyses, but did show the 215-bp allele at the Xgwm292-5D locus.
Microsatellite marker locus Xgwm212-5D, which had previously mapped 3.3 cM distal to Vrn-D1 (Snape et al., 2001), showed a linkage distance of 3.9 cM to Vrn-D1 in CS x CS(Hope5D). Xgwm212-5D exhibited marker alleles of 104 and 106 bp in CS and TD-E, respectively, whereas Hope and TD exhibited marker alleles of 102 bp. The marker Xgwm212-5D did not exhibit variation among the CIMMYT wheats and, with the exception of Milan/Sha7 (104 bp), all cultivars showed a marker allele of 102 bp. Therefore, the marker Xgwm212-5D does not qualify as a selection tool for Vrn-D1.
The complexity of genes involved in regulating photoperiod and vernalization response in wheat makes them ideal candidates for using marker assisted selection (MAS) strategies for their selection. In MAS procedures, the location of a frequently used marker is expected to be as close as possible to the target gene to have a low recombination frequency between the target gene and the marker. However, in the case of Vrn-D1 and Xgwm292-5D, a linkage distance of about 3 cM is apparently not effective enough, given that (i) the 215-bp allele was detected in vrn-D1 genotypes, and (ii) Vrn-D1 was found to be associated, albeit at low frequencies, with the other four alleles at the Xgwm292-5D locus. The assumption that different microsatellite alleles of Xgwm292-5D are linked with the Vrn-D1 allele is supported by the occurrence of a 221-bp marker allele in the cultivar Chinese Spring. These results suggest that it would be necessary to test for polymorphism before starting MAS in crosses of Vrn-D1 donors with wheat cultivars that were not genotyped in this study. In light of these results, the use of marker Xgwm292-5D in MAS is limited and closer flanking markers to the Vrn-D1 locus must first be identified. As suggested by Peng et al. (2000) and St
pie
et al. (2004), it is possible that the accuracy of MAS for Vrn-D1 will be improved if marker haplotypes, rather than a single marker, are used. Furthermore, the recent cloning of Vrn-Am1 from diploid wheat T. monococcum (Yan et al., 2003) should permit the development of perfect markers for Vrn-B1 and Vrn-D1, as has been done for Vrn-A1 (Sherman et al., 2004). Vrn phenotyping results from this study will provide a basis for marker validation once these markers are developed.
| ACKNOWLEDGMENTS |
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Received for publication November 17, 2004.
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