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a Plant Science Dep., South Dakota State Univ., Brookings, SD 57006
b Dep. of Plant Sciences, North Dakota State Univ., Fargo, ND 58105
c Dep. of Agronomy, Univ. of Missouri, Columbia, MO 65211
* Corresponding author (Jackie_Rudd{at}sdstate.edu)
| ABSTRACT |
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Abbreviations: AFLP, amplified fragment length polymorphism DON, deoxynivalenol FHB, Fusarium head blight QTL, quantitative trait locus RFLP, restriction fragment length polymorphism RIL, recombinant inbred line SSR, single sequence repeat
| INTRODUCTION |
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The United States Department of Agriculture (USDA) currently ranks FHB as the worst plant disease of wheat and barley since the stem rust (caused by Puccinia graminis Pers.:Pers.) epidemics of the 1950s (Wood et al., 1999). FHB epidemics have been documented in 26 states and five Canadian provinces. Yield losses in wheat since 1990 have exceeded 13 Tg (500 million bushels) with economic losses estimated at $2.5 billion (Windels, 2000). Wheat yields in 1993 were reduced by about 50% in northeastern North Dakota and 40% in northwestern Minnesota compared with 1992 (National Agricultural Statistics Service, 19931999). In barley, losses have been equally devastating with estimated losses from 1993 to 1999 totaling in excess of $400 million (Windels, 2000). Since 1993, North Dakota, South Dakota, and Minnesota have lost 73% of their malting barley market with losses in Minnesota alone approaching 95% (Windels, 2000).
The resurgence of FHB has united scientists, producers, industry, and politicians in an effort to find a solution to this disease. Nearly $10 million in new public and private funding has been generated to support FHB research and education in the USA (Windels, 2000). In 1999, the U.S. Wheat and Barley Scab Initiative supported research efforts of 66 principal scientists working on 111 research projects at 19 Land Grant Universities and the USDA Agricultural Research Service (U.S. Wheat and Barley Scab Initiative news release, http://www.scabusa.org/newpage13.htm, 1 Dec. 2000).
Scab is not a new problem. As early as 1891, Arthur (1891) stressed the importance of breeding for resistance to head blight in wheat. In the 1920s, plant pathologists and breeders observed that wheat genotypes differed in their susceptibility to FHB; however, differences in maturity made it hard to separate genotypic differences in susceptibility from disease escape (Immer and Christensen, 1943). Much of our present knowledge about FHB originates from extensive research that was done at the University of Minnesota from the 1920s through the 1950s (Hanson et al., 1950; Schroeder and Christensen, 1963). A severe rust epidemic, however, changed the focus of wheat research to stem rust and U.S. work on FHB was discontinued (Wilcoxson, 1993).
Worldwide, resistance to FHB is a major focus of wheat and barley breeding programs. In China, FHB research began in the 1950s and continues today (Liu and Wang, 1990). Japanese scientists initiated a major research effort in the 1960s (Nisikado, 1959) and currently have a strong FHB resistance effort in barley (Takeda and Heta, 1989). FSB resistance is also a major focus of breeding programs in several European countries, notably Hungary, Poland, Austria, Germany, and the Netherlands (Mesterházy, 1995; Meidaner, 1997; Snijders, 1990).
Several reviews have been written recently that address genetic resistance to FHB (Bai and Shaner, 1994; Mesterházy, 1995; Parry et al., 1995; Miedaner, 1997). Although this paper will contain some review of the literature, much of it has been compiled from an informal 1999 survey of 25 U.S. breeding programs working on FHB resistance. It also reports on recent progress in the germplasm and breeding programmatic areas of the U.S. Wheat and Barley Scab Initiative. These progress reports are available in full at the initiative website http://www.scabusa.org (verified January 12, 2001).
| Sources of Resistance in Wheat |
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Although Sumai 3 has been widely used by hexaploid wheat breeders, durum breeders have been less successful in using it as a source of resistance. This lack of success initially led researchers to believe that the resistance genes from Sumai 3 might be on the D genome and therefore would not recombine in tetraploid durum (AABB) where the D genome is absent. Since several molecular marker studies have in fact mapped resistance genes from Sumai 3 to the A and B genomes (Kolb et al., 2001), breeders now believe that the genetic background of the elite germplasm used by some durum breeding programs may be suppressing the expression of the Sumai 3 resistance (E. M. Elias, 1999, personal communication).
Other sources of resistance that have been widely used include Frontana from Brazil and Nobeokabouzu from Japan (Dubin et al., 1997). In addition, many incidental sources of resistance to FHB have been identified through routine screening of elite germplasm in breeding programs. Although the resistance is often only intermediate, these sources are attractive to breeders because they produce segregating populations that are adapted, have FHB resistance, and have acceptable agronomic and end-use quality characteristics. Some of these incidental sources of resistance include 2375 used primarily, in the USA spring wheat region, and Ernie (McKendry et al., 1995) and Freedom (Gooding et al., 1997) used in the eastern soft red winter wheat region of the USA. Although some variability for FHB resistance has been identified in elite durum germplasm, the level of resistance is much lower than that found in hexaploid wheat programs (E. M. Elias, 1999, personal communication).
Several programs have screened wild relatives for FHB resistance, but these efforts have been met with limited success. Wan et al. (1997) evaluated 1463 accessions of 85 species belonging to 17 genera of the Triticeae. Variation was found among species and within species. Although no accessions were immune, accessions from 18 species were found to be resistant or highly resistant to both initial infection and the spread of FHB in the spike. The genus Roegneria had the highest level of resistance with 67 of the 69 accessions tested being resistant to both initial infection and spread. Additionally, the wide-crossing program of CIMMYT has reported resistance in some synthetic hexaploid wheats, suggesting that some accessions of Aegilops tauschii Coss. may be resistant (Gilchrist et al., 1999). These sources of resistance have been difficult to use in breeding programs because of the well known problems associated with the direct use of alien genes including (i) lack of pairing between alien and wheat chromosomes, (ii) the quantitative nature of the resistance, and (iii) the agronomic inferiority of their hybrid progenies (Chen et al., 1997). The wild species may offer some hope to durum breeders, who have struggled to find acceptable levels of resistance in adapted germplasm (Jauhar and Peterson, 1999; Gilbert, 1998). Gilbert (1998) screened 96 accessions of Triticum dicoccoides (Koern. ex Asch. & Graebner) Aarons. and found six accessions with a useful level of resistance. Crosses are currently being made to transfer this resistance into elite durum germplasm.
With funding from the U.S. National Wheat and Barley Initiative, aggressive worldwide searches are now underway to identify new sources of resistance to FHB in wheat and barley. Centers have been established at the Univ. of Missouri, North Carolina State Univ., South Dakota State Univ., and North Dakota State Univ. for the introduction, screening, and distribution of new sources of resistance in winter, spring, and durum wheat and in barley (McKendry et al., 1999; Murphy et al., 1999; Zhang et al., 1999; Elias, 1999; Scholz et al., 1999). Researchers at these centers evaluated a total of 6269 accessions of wheat and barley in 1998 and 1999. Resistances identified will be confirmed in further tests and distributed to breeders either through the established regional nursery systems or by direct contact with the program leaders. Complete data for these sources of resistance by commodity group can be found under the germplasm programmatic area at the website of the U.S. National Wheat and Barley Scab Initiative (http://www.scabusa.org).
| Sources of Resistance in Barley |
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Additional sources of resistance in barley are the two-rowed accessions CIho4196, Zhedar 1, and Zhedar 2 from China; Fredrickson from Japan; Harrington and AC Oxbow from Canada; Kitchin from the USA; and Shyri and Atahualpa from Ecuador but developed and released by the ICARDA/CIMMYT Barley Breeding Program in Mexico. Barley breeders are screening their own elite germplasm for genotypes that may have inherently better FHB resistance and/or lower concentrations of DON than cultivars currently grown. Although moderately resistant genotypes have been identified that may be different from those from Europe and Asia, the levels of FHB resistance and DON accumulation in these genotypes are not as good as those observed in the accessions previously mentioned. Screening of all six-rowed spring barley accessions in the USDA-ARS National Small Grains Collection for FHB resistance is currently underway. About 50 accessions with FHB resistance similar to Chevron were identified in 1999. Seed from these accessions was harvested and DON concentration will be determined. The wild relatives of barley including H. bulbosum L., H. jubatum L., and H. spontaneum K. Koch are also being screened for resistance to FHB; however, no accessions have been identified that have acceptable FHB resistance.
| Resistance Types and Disease Assessment in Wheat and Barley |
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Morphological traits have also been associated with FHB resistance in barley. Two-rowed barley is more resistant to FHB than six-rowed barley (Xihang et al., 1991; Takeda and Heta, 1989; Gocho and Hirai, 1987) and in crosses between six-rowed and two-rowed genotypes two-rowed progenies were most resistant, followed by genotypes heterozygous for spike type. Six-rowed types were most susceptible (Takeda, 1990). Lateral floret size in two-rowed barley has also been associated with FHB resistance. Correlations between lateral floret size and Type II resistance, and lateral floret size and DON concentration were 0.63 and 0.54, respectively. A quantitative trait locus (QTL) affecting all three traits has been mapped to the centromeric region on chromosome 2H; however, it was not determined if genes for these three traits were linked or pleiotropic (Zhu et al., 1999).
Mesterházy (1995) described five types of physiological resistance, expanding on the two types described by Schroeder and Christensen (1963). These included (I) resistance to initial infection, (II) resistance to spread within the spike, (III) kernel size and number retention, (IV) yield tolerance, and (V) decomposition or non-accumulation of mycotoxins. In wheat, Type II resistance is most commonly assessed and Sumai 3 is the most commonly used source (Wagester et al, 1999; Liu and Wang, 1990; Dubin et al, 1997). It is measured by observing symptoms due to disease spread after some type of point inoculation. Type II resistance is not measured as frequently in barley as it is in wheat. In barley germplasm from the Midwest, the spread of FHB up and down the spike is not often observed; this has led breeders in that region to conclude that their germplasm may inherently have this type of resistance. Variation for Type II resistance in barley does exist in other regions. The ICARDA/CIMMYT barley breeding program screens for Type II resistance, and a QTL controlling this trait has been mapped to the centromeric region of chromosome 2H (Vivar et al., 1999). Type I resistance is usually measured by spraying plants with a conidial suspension and then counting infected spikelets 7 to 21 d post inoculation. It has also been measured by injecting inoculum into multiple spikelets per spike and assessing the percentage of infected spikelets at maturity (Wan et al., 1997). Accurate assessment of Type I resistance is difficult because the amount of inoculum actually applied is difficult to quantify and disease assessment is confounded by the Type II resistance of the germplasm being evaluated. A genotype must have Type II resistance before Type I resistance can be accurately measured. Type III resistance is measured by threshing infected spikes and observing the damage to the kernels. Kernel number reduction, kernel weight, test weight, or visual estimates of Fusarium-damaged kernels (tombstones) are common measurements used to assess Type III resistance. Type IV resistance or yield tolerance can be assessed by measuring grain yield of naturally or artificially inoculated spikes or plots and comparing the data with spikes or plots that do not show disease symptoms. Several programs have reported variation among cultivars in yield reduction at a given level of disease symptoms on the spikes. From a practical breeding perspective, the measurement of grain yield under heavy disease pressure should be a valuable tool for breeders who have both grain yield and FHB resistance as breeding objectives. Finally, Type V resistance, which is important from a grain utilization perspective, is identified by measuring DON concentration at a given level of FHB.
| Genetics of Resistance in Wheat |
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There is considerable evidence to support transgressive segregation for FHB resistance (Waldron et al., 1999; Jiang et al., 1994; Snijders, 1990). Sumai 3 was derived from a cross of two lines with intermediate levels of resistance and Ernie was selected from progeny of two moderately susceptible lines (McKendry et al., 1995). van Ginkel et al. (1996) reported that Frontana and Ning 7840 each had two dominant genes and that some of the progeny from the cross of these two lines had better resistance than either parent.
Molecular markers associated with FHB resistance have been identified by several laboratories (Kolb et al., 2001). Waldron et al. (1999) used restriction fragment length polymorphism (RFLP) markers to identify five genomic regions significantly associated with FHB in recombinant inbred lines (RILs) derived from the spring wheat cross Sumai 3 x Stoa while Bai et al. (1999) have successfully used amplified fragment length polymorphism (AFLP) analyses to identify markers associated with FHB resistance in RILs of the cross Ning 7840 x Clark. Our understanding of the genetics of FHB resistance will greatly increase as markers, particularly single sequence repeats (SSRs) become more readily available and the mapping of genes for different types and sources of resistance is completed.
| Genetics of Resistance in Barley |
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QTLs for FHB resistance and DON concentration in mapping populations developed using the resistant parents Zhedar 1 and Zhedar 2 were found in chromosomes 2H and 7H (L. Dahleen, 1999, personal communication). These chromosomal locations agreed with those identified by de la Pena et al. (1999) in Chevron. Efforts to identify QTL associated with DON concentration in these mapping populations are ongoing. Finally, as discussed earlier in this report, a QTL associated with Type II resistance of FHB was identified in chromosome 2H (Vivar et al., 1999). Ultimately, these QTLs will be critical to the incorporation of genes for multiple sources and types of resistance into a single cultivar.
| Screening for Fusarium Head Blight Resistance in Wheat |
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| Point Inoculation |
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| Spray Inoculation |
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Sources of variation in field-based evaluations are due to differences in anthesis dates which subject lines being evaluated to different environmental conditions, variable misting patterns in the field, and uneven inoculum distribution. The use of resistant and susceptible checks that differ in maturity is critical to assess both disease levels in the nursery and relative resistance of the lines being evaluated. Four checks are commonly used: early resistant, early susceptible, late resistant, and late susceptible. These checks are seeded at many locations in the field and are often seeded on different dates to check environmental variability.
At maturity, rows are harvested and grain is evaluated for diseased or tombstone kernels and DON concentration. Although these kernel evaluations (except tombstone kernels) can be confounded by the presence of other diseases and environmental conditions, they have proven to be useful to breeding programs and many researchers associate them with Type III and IV resistance. Grain yield, test weight, 1000-kernel weight, and percent shriveled kernels also provide estimates of these two types of resistance. DON concentration provides an estimate of Type V resistance.
| Grain Spawn |
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| Screening for FHB Resistance in Barley |
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| Breeding for FHB Resistance in Wheat |
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Most breeders realize that the Type II resistance of Suami 3 is not enough to protect adequately against severe FHB epidemics; hence the strategy is to combine Type II resistance with Type I and kernel retention. Many programs have introgressed the resistance from Sumai 3 into their adapted germplasm and then crossed these lines with other more adapted lines. The recent germplasm release from North Dakota State Univ., ND2710, was developed by this stepwise procedure. A selection from the cross Sumai 3/'Wheaton' was identified that had resistance comparable to Sumai 3 but had better agronomic performance. That selection was then crossed with Grandin to create the population from which ND2710 was selected. Breeding programs can now use ND2710 as a parent instead of Sumai 3.
Traditional breeding methods such as the pedigree method and single seed descent are being used for improving FHB in wheat; however, backcross breeding has not proven to be effective because genetic background appears to influence expression of FHB resistance. Recurrent selection has proven successful (Jiang et al., 1994) and could be useful to accumulate resistance genes conditioning different types and sources of resistance. Finally, to accelerate breeding efforts, doubled haploids are being used to more rapidly achieve homozygosity in selected populations. As well, off-season nurseries and greenhouses are used extensively by spring wheat and barley breeders to accomplish the same objective. Although not a common practice in winter wheat programs, Ohm (1999) has also reported on the use of an off-season nursery for winter wheat.
| Breeding for FHB Resistance and Low DON Concentration in Barley |
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A goal of midwestern six-rowed barley programs has been to transfer FHB resistance from two-rowed accessions into elite midwestern six-rowed malting barley germplasm. In crosses between six-rowed malting barley cultivars and Zhedar 1 and Zhedar 2; however, no six-rowed progenies have been identified with FHB resistance similar to that in the two-rowed parent. The lack of success in transferring the resistance from two-rowed to six-rowed barley was thought to be due to insufficient population size, unfavorable linkages between genes controlling row type and FHB resistance, and/or pleiotropy. A cross between Foster, a six-rowed malting barley cultivar, and CIho 4196, a two-rowed FHB resistant accession from China, suggested that these negative linkages could be broken when six-rowed progenies were identified with resistance similar to CIho 4196.
Finally, the biggest challenge that barley breeders face is the development of cultivars with the low to zero detectable concentrations of DON necessary for the malting and brewing industry. DON has been found to carry through the malting and brewing processes into the finished beer and has also been associated with gushing in beer (Schwarz et al., 1996). Under high disease pressure, even the most resistant barley accessions accumulate unacceptable levels of DON. Parent building and traditional breeding methodologies are being used to combine different types and sources of resistance to solve this problem. Breeding techniques and strategies are similar to those used in wheat.
In conclusion, the U.S. National Wheat and Barley Scab Initiative, a collaborative, cooperative national research initiative aimed at reducing the devastating losses associated with FHB in both wheat and barley is funding an aggressive attack on this disease in all classes of wheat and barley. Research is ongoing in six major areas including cultivar development, germplasm introduction and introgression, biotechnology, biological and chemical control, epidemiology, and food safety and toxicology. This initiative now drives the FHB research agenda in the USA and promises to enhance breeding for FHB resistance in wheat and barley through the identification of new sources of resistance, genetic analyses of those sources to identify resistances in which alleles differ from those currently known, the development of transgenic cultivars that carry effective anti-fungal genes, and the development of molecular markers that will enable breeders to combine efficiently and effectively genes conditioning both different sources of resistance and different types of resistance in single cultivars. Over 20 breeding programs in the USA alone are conducting research relative to FHB. Information is shared at national and international forums. Germplasm centers are identifying and distributing new sources of resistance. Elite lines are being shared via regional testing programs and an international FHB nursery will be in place by 2000. This multi-faceted and cooperative approach should enable breeders to develop highly resistant wheat and barley cultivars thereby, significantly reducing if not eliminating the devastating effects of FHB both nationally and worldwide.
Received for publication March 28, 2000.
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