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QTL Analysis of ICA Bunsi-Derived Resistance to White Mold in a Pinto x Navy Bean Cross

^a USDA-ARS, Vegetable and Forage Crops Research Unit, 24106 N. Bunn Rd., Prosser, WA 99350
^b Dep. of Crop and Soil Sciences, Michigan State Univ., East Lansing, MI 48824
^c Pioneer Hi-Bred International, Inc., 7250 NW 62nd Ave, Johnston, IA 50131
^d Dep. of Plant Sciences, North Dakota State Univ., Fargo, ND 58105

View larger version (16K): [in this window] [in a new window]   Fig. 1. Integration of partial linkage groups in Aztec/ND88–104–04 (AN) RIL population with the BAT93/Jalo EEP558 (BJ) core map. QTL locations conferring resistance to white mold in AN population depicted by solid bar, in BJ map extrapolated from QTL in Bunsi/Newport (Kolkman and Kelly, 2003) and Bunsi/Raven (Ender and Kelly, 2005) populations by open bar, and in BJ map extrapolated from QTL in PC50/XAN-159 population (Park et al., 2001) by cross-hatch bar. Framework RFLP markers for the core map have D and Bng prefixes (Freyre et al., 1998), defense related genes are italicized, and all other markers are RAPDs. For the AN linkage groups, GAF indicates a TRAP marker (Miklas et al., 2006b), E...M... markers are AFLPs with size of the amplified fragment indicated after the period, and all other markers are RAPDs with sizes similarly indicated.

View larger version (17K): [in this window] [in a new window]   Fig. 2. Simple composite interval mapping (sCIM) by MQTL (Tinker and Mather, 1995) for detection of QTL on linkage group B2 conditioning resistance to white mold disease severity in the Aztec/ND88–106–04 RIL population across four environments and stay green stem trait across two environments. The horizontal line represents the average of the 5% significance level for each trait based on 1000 permutations.

View larger version (22K): [in this window] [in a new window]   Fig. 3. Simple composite interval mapping (sCIM) by MQTL (Tinker and Mather, 1995) for detection of QTL on linkage group B3 conditioning resistance to white mold disease severity in the Aztec/ND88–106–04 RIL population across four environments, canopy porosity across four environments, and stay green stem trait across two environments. The horizontal line represents the average of the 5% significance level for each trait based on 1000 permutations.