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Published online 1 February 2006
Published in Crop Sci 46:700-705 (2006)
© 2006 Crop Science Society of America
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Efficient Deletion of Transgenic DNA from Complex Integration Locus of Rice Mediated by Cre/lox Recombination System

Sarah K. Moorea and Vibha Srivastava*,b

a Department of Crop, Soil & Environmental Sciences, University of Arkansas, Fayetteville, AR 72701
b Department of Crop, Soil & Environmental Sciences, and Department of Horticulture, University of Arkansas, Fayetteville, AR 72701


Figure 1
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Fig. 1. Schematic representation of DNA constructs, and molecular strategy of Cre/lox-mediated gene deletion and re-integration. Donor locus developed by cobombardment of plasmids, p35Shpt and pVS55, contains loxP- and lox75-flanked neomycin phosphotransferase gene (npt) (promoterless) and ß-glucuronidase gene (gusA). Target locus developed by the integration of pVS52 construct contains a cre transcription unit and a target lox76 site. Cre/lox recombination is expected to excise lox-flanked DNA fragments in the form of extra-chromosomal circles containing lox75 that may interact with the genomic lox76 site in the target T5 locus to generate a predictable integration locus. Lox sites are represented as arrowheads between filled (mutant) or empty (wild-type) bars. EcoRI (E) sites are shown for each vector and expected fragment sizes are given in kb. Position of PCR primers are indicated by arrowheads. DNA fragments used to probe Southern blot are underlined. 35S, CaMV 35S promoter; hpt, hygromycin phosphotransferase gene; nos, nopaline synthase transcription termination signal; pubi, maize ubi-1 promoter; loxP wild-type lox site; lox75, mutant (left arm) lox site; lox76, mutant (right arm) lox site; dmlox, double mutant lox site.

 

Figure 2
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Fig. 2. Southern analysis of F1 hybrids. EcoRI-digested genomic DNA isolated from parental lines (L1, L2, and T5), and 8- to 9-wk-old F1 hybrids were probed on Southern blots with radio-labeled DNA fragments of gusA, hpt, and cre genes shown in Fig. 1. The fragment sizes are given in kb.

 





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