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Published online 24 January 2006
Published in Crop Sci 46:448-455 (2006)
© 2006 Crop Science Society of America
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Target Region Amplification Polymorphism (TRAP) for Assessing Genetic Diversity in Sugarcane Germplasm Collections

S. Alwalaa, A. Sumana, J. A. Arroa, J. C. Veremisb and C. A. Kimbenga,*

a Dep. of Agronomy and Environmental Management, Louisiana State University Agricultural Center, Baton Rouge, LA 70803
b USDA-ARS, SRRC, Sugarcane Research Unit, 5883 USDA Road, Houma, LA 70360


Figure 1
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  		Fig. 1. Grouping among 30 genotypes from a sugarcane germplasm collection based on 18 TRAP primer combinations using the UPGMA method. Numbers represent values from boostrap analysis. Abbreviations: Mi, Miscanthus; Er, Erianthus; Cu, Cultivar; Ssp, Saccharum spontaneum; So, S. officinarum; Sr, S. robustum; Sb, S. barberi; Ssi, S. sinense; Hy, Hybrid; Dw, Dwarf.

 

Figure 2
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  		Fig. 2. Association among 30 genotypes from a sugarcane germplasm collection as revealed by PCoA of genetic distances based on 18 TRAP primer combinations. Abbreviations: Mi, Miscanthus; Er, Erianthus; Cu, Cultivar; Ssp, Saccharum spontaneum; So, S. officinarum; Sr, S. robustum; Sb, S. barberi; Ssi, S. sinense; Hy, Hybrid; Dw, Dwarf. Numbers were used to uniquely identify a genotype (for example Ssp6) when there was more than one genotype representing a species or group.

 




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