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Published online 24 June 2005
Published in Crop Sci 45:1571-1577 (2005)
© 2005 Crop Science Society of America
677 S. Segoe Rd., Madison, WI 53711 USA
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Construction and Characterization of a BAC Library of a Cold-Tolerant Hexaploid Wheat Cultivar

Indira Ratnayaka, Monica Båga, D. Brian Fowler and Ravindra N. Chibbar*

Dep. of Plant Sciences, Univ. of Saskatchewan, 51 Campus Drive, Saskatoon, SK S7N 5A8, Canada



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Fig. 1. Determination of organelle DNA contamination present in the Norstar BAC library. Hybridization signals obtained from high-density filters carrying 18432 double-spotted clones after hybridization to 32P-labeled chloroplast rbcL and psbA (a) and mitochondrial cox1 (b) probes. Positive clones are identified by a duplicated signal pattern.

 


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Fig. 2. Determination of BAC clone insert sizes. (a) PFGE analysis of fragments generated from NotI digestion of 18 BAC DNA samples. Low Range PFG marker was used as size standard (M). (b) Histogram showing distribution of insert sizes determined from analysis of 119 BAC clones.

 


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Fig. 3. Screening of the BAC library using gwm18 SSR marker. Agarose gel electrophoresis of PCR amplification products obtained from screening the entire library of 69 pools. The six pools showing the expected 175-bp fragment for gwm18 are indicated by vertical arrows. Lanes of samples containing Norstar genomic DNA (N), no DNA (C), and 100 bp ladder (M) are indicated.

 


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Fig. 4. Identification of BAC clones carrying highly-repetitive DNA sequences. (a) PFGE analysis of 15 BAC clones digested with NotI. Low Range PFG (M) was used as size standard. (b) Autoradiogram of gel in (a) after blotting to Hybond-N+ membrane and hybridization to 32P-labeled Norstar nuclear DNA.

 


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Fig. 5. Stability test of BAC clones carrying repetitive DNA. HindIII fingerprints produced from plasmid DNA extracted from five BAC clones after 1, 2, 3, 4, and 5 d of growth. Low Range PFG marker (M) was used as size standard.

 





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