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A Haplotype-Based Method for QTL Mapping of F₁ Populations in Outbred Plant Species

^a University of Florida, C/O USDA-ARS, SHRS, 13601 Old Cutler Road, Miami, FL 33158, USA
^b USDA-ARS, SHRS, 13601 Old Cutler Road, Miami, FL 33158, USA

View larger version (26K): [in a new window]   Fig. 1. Likelihood ratio curves vs. genome position of the haplotype-based QTL analyses for two linkage groups of 100 cM in length each, of the simulated five F1 populations (Pop1, ... , Pop5) of 100 individuals each. The single population analyses and the combined analyses (Comb) were performed under the additive and dominance effects model.

View larger version (25K): [in a new window]   Fig. 2. Likelihood ratio curves vs. genome position of the haplotype-based QTL analyses for two linkage groups of 100 cM in length each, of the simulated five F1 populations (Pop 1, ... , Pop5) of 100 individuals each. The single population analyses and the combined analyses (Comb) were performed under the additive and dominance effects model. Cofactors were included in the analyses with a window of 5 cM.