Crop Science Grow Your Career with CSSA
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


This Article
Right arrow Figures Only
Right arrow Full Text Free
Right arrow Full Text (PDF) Free
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via ISI Web of Science (33)
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Mavromatis, T.
Right arrow Articles by Hoogenboom, G.
Right arrow Search for Related Content
PubMed
Right arrow Articles by Mavromatis, T.
Right arrow Articles by Hoogenboom, G.
Agricola
Right arrow Articles by Mavromatis, T.
Right arrow Articles by Hoogenboom, G.
Related Collections
Right arrow Soybean
Right arrow Crop Models
Right arrow Plant and Environment Interactions
Crop Science 41:40-51 (2001)
© 2001 Crop Science Society of America

CROP BREEDING, GENETICS & CYTOLOGY

Developing Genetic Coefficients for Crop Simulation Models with Data from Crop Performance Trials

T. Mavromatisa, K.J. Booteb, J.W. Jonesa, A. Irmaka, D. Shindec and G. Hoogenboomd

a Dep. of Agricultural and Biological Engineering, Univ. of Florida, Gainesville, FL 32611
b Dep. of Agronomy, Univ. of Florida, Gainesville, FL 32611
c Tropical Research and Education Center, Univ. of Florida, Homestead, FL 33031
d Dep. of Biological and Agricultural Engineering, Univ. of Georgia, 30223

Corresponding author (theo{at}agen.ufl.edu)

Successful uses of crop models in technology transfer and decision support tools require that coefficients describing new cultivars be available as soon as the cultivars are marketed. The objectives of this study were (i) to develop an approach to estimate cultivar coefficients for the CROPGRO–Soybean model from typical information provided by crop performance tests, (ii) to evaluate the suitability of yield trial data for deriving genetic coefficients and site-specific soil traits for use in crop models, and (iii) to explore the extent to which our approach allowed the crop model to reproduce observed genotype x environment (GE) interactions, cultivar ranking, and year-to-year yield variability. Crop performance tests typically record harvest maturity date, seed yield, seed size, height, and lodging. A stepwise procedure using data on 11 cultivars grown at five sites in Georgia over 4 to 10 yr efficiently decreased the root mean square error (RMSE) between observed and predicted data. For `Stonewall', a maturity group VII cultivar, the RMSE of 769 kg ha-1 between the actual and modeled seed yield, estimated initially by means of the existing general maturity group coefficients, was reduced to 404 kg ha-1. For the same cultivar, the initial RMSE of 5.3 and 9.3 d between the actual and simulated anthesis and harvest maturity dates, respectively, estimated by means of the existing general maturity group coefficients, were reduced to 2.9 and 5.8 d. In addition to deriving useful information on site characteristics and cultivar traits, our approach has enabled CROPGRO to satisfactorily mimic the genotypic yield ranking and much of observed genotype x environment interactions. Across all environments, the difference in genotype ranking based on yield between measured and predicted values was one or less for 61% of the environments.

Abbreviations: CSDL, critical short daylength • DOY, day of year • GE, genotype x environment • RMSE, root mean square error • SLPF, soil fertility factor




This article has been cited by other articles:


Home page
Crop Sci.Home page
B. Suriharn, A. Patanothai, K. Pannangpetch, S. Jogloy, and G. Hoogenboom
Yield Performance and Stability Evaluation of Peanut Breeding Lines with the CSM-CROPGRO-Peanut Model
Crop Sci., July 1, 2008; 48(4): 1365 - 1372.
[Abstract] [Full Text] [PDF]


Home page
Crop Sci.Home page
W. Putto, A. Patanothai, S. Jogloy, and G. Hoogenboom
Determination of Mega-Environments for Peanut Breeding Using the CSM-CROPGRO-Peanut Model
Crop Sci., May 1, 2008; 48(3): 973 - 982.
[Abstract] [Full Text] [PDF]


Home page
Crop Sci.Home page
B. Suriharn, A. Patanothai, K. Pannangpetch, S. Jogloy, and G. Hoogenboom
Determination of Cultivar Coefficients of Peanut Lines for Breeding Applications of the CSM-CROPGRO-Peanut Model
Crop Sci., March 1, 2007; 47(2): 607 - 619.
[Abstract] [Full Text] [PDF]


Home page
Crop Sci.Home page
C. D. Messina, J. W. Jones, K. J. Boote, and C. E. Vallejos
A Gene-Based Model to Simulate Soybean Development and Yield Responses to Environment
Crop Sci., January 24, 2006; 46(1): 456 - 466.
[Abstract] [Full Text] [PDF]


Home page
Agron. J.Home page
P. Pedersen, K. J. Boote, J. W. Jones, and J. G. Lauer
Modifying the CROPGRO-Soybean Model to Improve Predictions for the Upper Midwest
Agron. J., March 1, 2004; 96(2): 556 - 564.
[Abstract] [Full Text] [PDF]


Home page
Agron. J.Home page
G. J. Carbone, L. O. Mearns, T. Mavromatis, E. J. Sadler, and D. Stooksbury
Evaluating CROPGRO-Soybean Performance for Use in Climate Impact Studies
Agron. J., May 1, 2003; 95(3): 537 - 544.
[Abstract] [Full Text] [PDF]


Home page
Agron. J.Home page
K. J. Boote, J. W. Jones, W. D. Batchelor, E. D. Nafziger, and O. Myers
Genetic Coefficients in the CROPGRO-Soybean Model: Links to Field Performance and Genomics
Agron. J., January 1, 2003; 95(1): 32 - 51.
[Abstract] [Full Text] [PDF]


Home page
Agron. J.Home page
G. Hoogenboom and J. W. White
Improving Physiological Assumptions Of Simulation Models By Using Gene-Based Approaches
Agron. J., January 1, 2003; 95(1): 82 - 89.
[Abstract] [Full Text] [PDF]


Home page
Agron. J.Home page
X. Yin, P. Stam, M. J. Kropff, and A. H. C. M. Schapendonk
Crop Modeling, QTL Mapping, and Their Complementary Role in Plant Breeding
Agron. J., January 1, 2003; 95(1): 90 - 98.
[Abstract] [Full Text] [PDF]


Home page
Agron. J.Home page
D. C. Nielsen, L. Ma, L. R. Ahuja, and G. Hoogenboom
Simulating Soybean Water Stress Effects with RZWQM and CROPGRO Models
Agron. J., November 1, 2002; 94(6): 1234 - 1243.
[Abstract] [Full Text] [PDF]


Home page
Crop Sci.Home page
T. Mavromatis, K. J. Boote, J. W. Jones, G. G. Wilkerson, and G. Hoogenboom
Repeatability of Model Genetic Coefficients Derived from Soybean Performance Trials across Different States
Crop Sci., January 1, 2002; 42(1): 76 - 89.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
The SCI Journals Agronomy Journal Vadose Zone Journal
Journal of Natural Resources
and Life Sciences Education
Soil Science Society of America Journal
Journal of Plant Registrations Journal of
Environmental Quality
The Plant Genome
Copyright © 2001 by the Crop Science Society of America.