|
|
||||||||
Dep. of Agronomy and Dep. of Statistics, Univ. of Kentucky, Lexington, KY 40546-0091
* Corresponding author.
The additive main effects and multiplicative interaction (AMMI) model has been recommended for cultivar trials repeated across locations and/or years. Previous studies, using approximate F-tests introduced by Gollob, have declared more AMMI interaction principal components (PCs) significant than cross validation could show to predictively useful. This study used Monte Carlo simulation to investigate whether such a result in an international maize (Zea Mays L.) yield trial of nine cultivars in 20 environments could be wholly or partially explained by liberality of the Gollob tests and also to compare properties of Gollob tests and several more conservative procedures. Gollob tests were found extremely liberal (Type I error rate as high as 66% when the first interaction PC in a 9 by 20 table is null) and AMMI users are warned not to rely on them. Tests known as FGHI and FGH2 were essentially equivalent and effectively controlled Type I error rates at or below the intended level, but were conservative for any component for which the previous component was small. Simulation tests and iterated simulation tests with greater power than FGHI and FGH2, but apparently with adequate control of Type I error rates, were developed. Simulation results suggest that Fant or FGH1 could usually be used to choose a predictive model with only a small loss in accuracy, and sometimes a gain, as compared to the expected model choice by cross validation with half of the data used for modeling and the other half for validation. In some cases cross validation is likely to choose a model with fewer PCs than the optimal truncated model obtainable from the full data set. If cross validation is used to choose a model, it is recommended that all but one replication should be used for modeling and only one for validation.
Received for publication May 18, 1992.
This article has been cited by other articles:
![]() |
Y.-G. Cho, H.-J. Kang, J.-S. Lee, Y.-T. Lee, S.-J. Lim, H. Gauch, M.-Y. Eun, and S. R. McCouch Identification of Quantitative Trait Loci in Rice for Yield, Yield Components, and Agronomic Traits across Years and Locations Crop Sci., November 7, 2007; 47(6): 2403 - 2417. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. G. Gauch Jr. Statistical Analysis of Yield Trials by AMMI and GGE Crop Sci., May 18, 2006; 46(4): 1488 - 1500. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Moreno-Gonzalez, J. Crossa, and P. L. Cornelius Additive Main Effects and Multiplicative Interaction Model: I. Theory on Variance Components for Predicting Cell Means Crop Sci., November 1, 2003; 43(6): 1967 - 1975. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Moreno-Gonzalez, J. Crossa, and P. L. Cornelius Additive Main Effects and Multiplicative Interaction Model: II. Theory on Shrinkage Factors for Predicting Cell Means Crop Sci., November 1, 2003; 43(6): 1976 - 1982. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. A. Lee, T. K. Doerksen, and L. W. Kannenberg Genetic Components of Yield Stability in Maize Breeding Populations Crop Sci., November 1, 2003; 43(6): 2018 - 2027. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. T. dos S. Dias and W. J. Krzanowski Model Selection and Cross Validation in Additive Main Effect and Multiplicative Interaction Models Crop Sci., May 1, 2003; 43(3): 865 - 873. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. Yan, L.A. Hunt, Q. Sheng, and Z. Szlavnics Cultivar Evaluation and Mega-Environment Investigation Based on the GGE Biplot Crop Sci., May 1, 2000; 40(3): 597 - 605. [Abstract] [Full Text] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| The SCI Journals | Agronomy Journal | Vadose Zone Journal | |||
| Journal of Plant Registrations | Soil Science Society of America Journal | ||||
| Journal of Natural Resources and Life Sciences Education |
Journal of Environmental Quality |
||||